Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015885804.1_cds_XP_016439902.1_35412
CDS Infomation

[gene=LOC107765734] [db_xref=GeneID:107765734] [protein=endoglucanase 8-like] [protein_id=XP_016439902.1] [location=complement(join(59598..59921,60019..60176,60275..60383,60511..60678,60766..60858,61329..61736,61977..62198))] [gbkey=CDS]
Sequence

ATGATTGGTTGCAGAAAATCTACTTGCCAAGTGCTGAGAATAATAGCAACAATTGTCTGC
TTGACAGCCACGGTTGTAGCAAAGGTTCCTAATCCTAATTATGCTGATGCCTTAACAAAG
AGTATTCTCTTCTTCGAGGGACAAAGGTCTGGTAAATTACACTCTAACCAGCGCGCGACT
TGGAGAAAAGATTCTGCTCTTCATGATGGAGCTGACAAGGGTGTGGATTTGGTAGGTGGG
TACTATGATGCTGGTGACAATATCAAGTTCCATTTTCCAATGGCTTTTACTACGACCATG
TTAGCTTGGAGTGTCGAGCAGTTCAAAAATACAATGGGATCAGACTTACAACACGCCATG
GAGGCAATCAGGTGGTCCACGGACTATTTCTTAAAGGCCACAAACATTCCCAACGTAGTA
TTTGCACAAGTAGGAAACGCAGAGGCTGATCATAACTGCTGGGAAAGGCCTGAAGATATG
GACACGCCGCGTACTACTTTTGCAGTTACAGCACAAGCTCCGGGTTCTGAAGTTTCTGCT
GAGATTGCTGCTGCTCTTGCTGCTGCCTCCGTCGTGTTTAAGCCTTCTGATCCCGCATAT
TCCAAATTGCTTGCTAACAGAGCCGTCCAGGTTTTTGAATTTGCGGATAAATACAGGGGA
TCTTATAATGACAGCATAGGACCTTGGGTGTGCCCATTCTACTGTAATTACAACGGATAC
AATGATGAATTGCTTTGGGCTGCAGCATGGCTACTCAAAGCTACAAGGAAGCCTATATAT
TGGAACTACGTTAAGCAAAATATAATAAACTTCAAATCGGACATCGAAAGTGGATTATCA
GAATTTGGATGGGATGCCAAGCATGCCGGTATCAATGTGCTTATCTCCAAGTTTGTTCTC
GATAACCCTTCAAATGCAAACCCCTTCCTTCCTTATGCTGATACATTTGTCTGCAGTGTA
TTACCTGAATCTCCTACCAATACAGTTAGATACACTCCAGGTGGACTCATGTACAAAGCG
GGGATTTGTAATATGCAAAATCCAACAGCTCTATCGTTTCTACTTCTAACCTATGCGCGC
TACATGAAGAGCAGAGTAATTCGCTGTGGCAACGTTGATGTAACTCAAAAGATGCTAATA
CGTTTTGCAAGAAGCCAGGTGAATTATATTCTTGGGAGAAATCCAATGAACATGTCATAC
ATGGTTGGATATGGAACAAAATTTCCTCAAAGAATACACCATAGAGGGTCTTCATTGCCA
TCTATTGATCAATATCCAGAGAAGATAGGATGTAAAGAAGGGACACCATATTTCCTAAGT
GAAAGCTCAAATCCCAACTTGCATATAGGGGCAGTAGTTGGAGGACCTGATATCAAAGAT
TATTTTGCTGATTCAAGACTTAGTTCTTCCCAGTCAGAACCAGCTACATATGTAAATGCA
CCACTTGTTGGCCTCTTGGCTTATTTTAAAGCACATCCCTAG

Peptide Sequence

PEP ID

XP_016439902.1
PEP Infomation

PREDICTED: endoglucanase 8-like [Nicotiana tabacum]
Sequence

MIGCRKSTCQVLRIIATIVCLTATVVAKVPNPNYADALTKSILFFEGQRSGKLHSNQRAT
WRKDSALHDGADKGVDLVGGYYDAGDNIKFHFPMAFTTTMLAWSVEQFKNTMGSDLQHAM
EAIRWSTDYFLKATNIPNVVFAQVGNAEADHNCWERPEDMDTPRTTFAVTAQAPGSEVSA
EIAAALAAASVVFKPSDPAYSKLLANRAVQVFEFADKYRGSYNDSIGPWVCPFYCNYNGY
NDELLWAAAWLLKATRKPIYWNYVKQNIINFKSDIESGLSEFGWDAKHAGINVLISKFVL
DNPSNANPFLPYADTFVCSVLPESPTNTVRYTPGGLMYKAGICNMQNPTALSFLLLTYAR
YMKSRVIRCGNVDVTQKMLIRFARSQVNYILGRNPMNMSYMVGYGTKFPQRIHHRGSSLP
SIDQYPEKIGCKEGTPYFLSESSNPNLHIGAVVGGPDIKDYFADSRLSSSQSEPATYVNA
PLVGLLAYFKAHP

Transcript Sequence

Gene sequence data has not been registered.